Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFL33893.1 | SFM18718.1 | SAMN05421830_101676 | SAMN05421830_11913 | Fructose-bisphosphate aldolase, class II. | tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA. | 0.444 |
SFL33893.1 | tmk | SAMN05421830_101676 | SAMN05421830_101683 | Fructose-bisphosphate aldolase, class II. | dTMP kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | 0.475 |
SFM18718.1 | SFL33893.1 | SAMN05421830_11913 | SAMN05421830_101676 | tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA. | Fructose-bisphosphate aldolase, class II. | 0.444 |
SFM18718.1 | def | SAMN05421830_11913 | SAMN05421830_103145 | tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA. | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 0.417 |
SFM18718.1 | tmk | SAMN05421830_11913 | SAMN05421830_101683 | tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA. | dTMP kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | 0.447 |
def | SFM18718.1 | SAMN05421830_103145 | SAMN05421830_11913 | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA. | 0.417 |
tmk | SFL33893.1 | SAMN05421830_101683 | SAMN05421830_101676 | dTMP kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | Fructose-bisphosphate aldolase, class II. | 0.475 |
tmk | SFM18718.1 | SAMN05421830_101683 | SAMN05421830_11913 | dTMP kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA. | 0.447 |