STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL45962.1Regulatory protein, Fis family. (335 aa)    
Predicted Functional Partners:
SFM09194.1
PAS domain S-box-containing protein; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
   
 0.958
SFL29029.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
   
 0.926
SFM18834.1
PAS domain S-box-containing protein.
   
 0.926
SFL71250.1
PAS domain S-box-containing protein.
   
 0.904
SFL86537.1
PAS domain S-box-containing protein.
   
 0.901
SFL91071.1
PAS domain S-box-containing protein.
   
 0.880
SFL97630.1
PAS domain S-box-containing protein.
   
 0.847
SFL45942.1
Outer membrane protein assembly factor BamD, BamD/ComL family.
       0.800
SFL31497.1
PAS domain S-box-containing protein.
   
 0.793
SFL45923.1
Hypothetical protein; Belongs to the MEMO1 family.
       0.792
Your Current Organism:
Desulfomicrobium norvegicum
NCBI taxonomy Id: 52561
Other names: D. norvegicum, Desulfovibrio desulfuricans (strain Norway 4), Desulfovibrio desulfuricans norway, NCIMB 8310, strain Norway 4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.