Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDK45576.1 | SDK45645.1 | SAMN04487971_10156 | SAMN04487971_10158 | Arabinose-5-phosphate isomerase; Belongs to the SIS family. GutQ/KpsF subfamily. | Hypothetical protein. | 0.613 |
SDK45576.1 | SDK45729.1 | SAMN04487971_10156 | SAMN04487971_10160 | Arabinose-5-phosphate isomerase; Belongs to the SIS family. GutQ/KpsF subfamily. | Glutamate synthase (NADPH) large subunit. | 0.955 |
SDK45576.1 | SDL50777.1 | SAMN04487971_10156 | SAMN04487971_11212 | Arabinose-5-phosphate isomerase; Belongs to the SIS family. GutQ/KpsF subfamily. | Enterobactin synthetase component F. | 0.446 |
SDK45645.1 | SDK45576.1 | SAMN04487971_10158 | SAMN04487971_10156 | Hypothetical protein. | Arabinose-5-phosphate isomerase; Belongs to the SIS family. GutQ/KpsF subfamily. | 0.613 |
SDK45645.1 | SDK45729.1 | SAMN04487971_10158 | SAMN04487971_10160 | Hypothetical protein. | Glutamate synthase (NADPH) large subunit. | 0.848 |
SDK45645.1 | SDK46936.1 | SAMN04487971_10158 | SAMN04487971_101101 | Hypothetical protein. | 3-oxoacyl-[acyl-carrier-protein] synthase I; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.625 |
SDK45645.1 | SDK64761.1 | SAMN04487971_10158 | SAMN04487971_102116 | Hypothetical protein. | Threonine dehydrogenase. | 0.613 |
SDK45645.1 | SDK66768.1 | SAMN04487971_10158 | SAMN04487971_102197 | Hypothetical protein. | [Acyl-carrier-protein] S-malonyltransferase. | 0.653 |
SDK45645.1 | SDK78947.1 | SAMN04487971_10158 | SAMN04487971_103108 | Hypothetical protein. | Benzoate/toluate 1,2-dioxygenase reductase subunit. | 0.604 |
SDK45645.1 | SDL16532.1 | SAMN04487971_10158 | SAMN04487971_10724 | Hypothetical protein. | 3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 0.669 |
SDK45645.1 | SDL50777.1 | SAMN04487971_10158 | SAMN04487971_11212 | Hypothetical protein. | Enterobactin synthetase component F. | 0.624 |
SDK45645.1 | SDL59394.1 | SAMN04487971_10158 | SAMN04487971_11435 | Hypothetical protein. | Threonine dehydrogenase. | 0.652 |
SDK45645.1 | SDL75518.1 | SAMN04487971_10158 | SAMN04487971_12215 | Hypothetical protein. | Ferredoxin-NADP reductase. | 0.604 |
SDK45729.1 | SDK45576.1 | SAMN04487971_10160 | SAMN04487971_10156 | Glutamate synthase (NADPH) large subunit. | Arabinose-5-phosphate isomerase; Belongs to the SIS family. GutQ/KpsF subfamily. | 0.955 |
SDK45729.1 | SDK45645.1 | SAMN04487971_10160 | SAMN04487971_10158 | Glutamate synthase (NADPH) large subunit. | Hypothetical protein. | 0.848 |
SDK45729.1 | SDK78947.1 | SAMN04487971_10160 | SAMN04487971_103108 | Glutamate synthase (NADPH) large subunit. | Benzoate/toluate 1,2-dioxygenase reductase subunit. | 0.446 |
SDK45729.1 | SDL75518.1 | SAMN04487971_10160 | SAMN04487971_12215 | Glutamate synthase (NADPH) large subunit. | Ferredoxin-NADP reductase. | 0.446 |
SDK46936.1 | SDK45645.1 | SAMN04487971_101101 | SAMN04487971_10158 | 3-oxoacyl-[acyl-carrier-protein] synthase I; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | Hypothetical protein. | 0.625 |
SDK46936.1 | SDK66768.1 | SAMN04487971_101101 | SAMN04487971_102197 | 3-oxoacyl-[acyl-carrier-protein] synthase I; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | [Acyl-carrier-protein] S-malonyltransferase. | 0.998 |
SDK46936.1 | SDL16532.1 | SAMN04487971_101101 | SAMN04487971_10724 | 3-oxoacyl-[acyl-carrier-protein] synthase I; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 0.905 |
page 1 of 3