STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK66034.1(R)-ethylmalonyl-CoA mutase. (652 aa)    
Predicted Functional Partners:
SDL28126.1
methylmalonyl-CoA mutase.
 
0.997
SDL00309.1
LAO/AO transport system kinase.
  
 0.987
SDL32930.1
methylmalonyl-CoA epimerase.
 
  
 0.985
SDK69223.1
(2S)-methylsuccinyl-CoA dehydrogenase.
 
 
 0.958
SDK66015.1
crotonyl-CoA carboxylase/reductase.
 
  
 0.946
SDL25649.1
Indolepyruvate ferredoxin oxidoreductase.
    
 0.943
SDL56432.1
Glyoxalase family protein.
    
 0.938
SDK62185.1
Acetyl-CoA hydrolase/transferase N-terminal domain-containing protein.
  
 
 0.867
SDK62203.1
Acetyl-CoA hydrolase/transferase C-terminal domain-containing protein.
  
 
 0.867
SDK99145.1
L-erythro-3-methylmalyl-CoA dehydratase.
 
  
 0.846
Your Current Organism:
Paracoccus chinensis
NCBI taxonomy Id: 525640
Other names: CGMCC 1.7655, NBRC 104937, P. chinensis, Paracoccus chinensis Li et al. 2009, Paracoccus sp. KS-11, strain KS-11
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