STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK89389.1Uncharacterized domain 1-containing protein. (139 aa)    
Predicted Functional Partners:
SDK89434.1
Enoyl-CoA hydratase/carnithine racemase.
    
  0.606
rplM
LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.
  
    0.600
rpsI
SSU ribosomal protein S9P; Belongs to the universal ribosomal protein uS9 family.
       0.598
SDK78947.1
Benzoate/toluate 1,2-dioxygenase reductase subunit.
  
 
  0.511
SDL75518.1
Ferredoxin-NADP reductase.
  
 
  0.511
SDL89071.1
Ferredoxin-NADP reductase.
  
 
  0.511
SDK98488.1
3-hydroxyacyl-CoA dehydrogenase.
 
 
 0.405
Your Current Organism:
Paracoccus chinensis
NCBI taxonomy Id: 525640
Other names: CGMCC 1.7655, NBRC 104937, P. chinensis, Paracoccus chinensis Li et al. 2009, Paracoccus sp. KS-11, strain KS-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.