STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL01295.1Phage portal protein, HK97 family. (410 aa)    
Predicted Functional Partners:
SDL01134.1
Phage conserved hypothetical protein, phiE125 gp8 family.
 
   0.995
SDL01200.1
Phage major capsid protein, HK97 family.
 
 
 
 0.995
SDL01045.1
Phage major tail protein, TP901-1 family.
 
   0.993
SDL00908.1
Phage conserved hypothetical protein BR0599.
 
   0.992
SDL00928.1
TIGR02217 family protein.
 
 
   0.992
SDL01076.1
Protein of unknown function.
 
 
   0.992
SDL01113.1
Head-tail adaptor.
 
   0.992
SDL01232.1
Prohead peptidase. Unknown type peptidase. MEROPS family U35.
 
   
 0.966
SDL01321.1
Large terminase phage packaging protein.
 
     0.925
SDL01266.1
Hypothetical protein.
 
     0.886
Your Current Organism:
Paracoccus chinensis
NCBI taxonomy Id: 525640
Other names: CGMCC 1.7655, NBRC 104937, P. chinensis, Paracoccus chinensis Li et al. 2009, Paracoccus sp. KS-11, strain KS-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.