Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDK49426.1 | SDK91084.1 | SAMN04487971_101177 | SAMN04487971_10465 | Cystathione beta-lyase. | 5,10-methylenetetrahydrofolate reductase (NAD(P)); Belongs to the methylenetetrahydrofolate reductase family. | 0.487 |
SDK49426.1 | SDL10252.1 | SAMN04487971_101177 | SAMN04487971_106110 | Cystathione beta-lyase. | O-succinylhomoserine sulfhydrylase. | 0.945 |
SDK49426.1 | SDL12303.1 | SAMN04487971_101177 | SAMN04487971_106179 | Cystathione beta-lyase. | Cysteine synthase A. | 0.919 |
SDK49426.1 | SDL25113.1 | SAMN04487971_101177 | SAMN04487971_10821 | Cystathione beta-lyase. | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.911 |
SDK49426.1 | SDL28238.1 | SAMN04487971_101177 | SAMN04487971_108121 | Cystathione beta-lyase. | Homoserine dehydrogenase. | 0.896 |
SDK49426.1 | SDL28535.1 | SAMN04487971_101177 | SAMN04487971_108129 | Cystathione beta-lyase. | O-acetylhomoserine sulfhydrylase. | 0.918 |
SDK49426.1 | ilvA | SAMN04487971_101177 | SAMN04487971_107196 | Cystathione beta-lyase. | L-threonine ammonia-lyase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | 0.897 |
SDK54002.1 | SDL10252.1 | SAMN04487971_101305 | SAMN04487971_106110 | Sulfite reductase (NADPH) hemoprotein beta-component. | O-succinylhomoserine sulfhydrylase. | 0.939 |
SDK54002.1 | SDL12303.1 | SAMN04487971_101305 | SAMN04487971_106179 | Sulfite reductase (NADPH) hemoprotein beta-component. | Cysteine synthase A. | 0.962 |
SDK54002.1 | SDL25113.1 | SAMN04487971_101305 | SAMN04487971_10821 | Sulfite reductase (NADPH) hemoprotein beta-component. | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.478 |
SDK54002.1 | SDL28535.1 | SAMN04487971_101305 | SAMN04487971_108129 | Sulfite reductase (NADPH) hemoprotein beta-component. | O-acetylhomoserine sulfhydrylase. | 0.715 |
SDK91084.1 | SDK49426.1 | SAMN04487971_10465 | SAMN04487971_101177 | 5,10-methylenetetrahydrofolate reductase (NAD(P)); Belongs to the methylenetetrahydrofolate reductase family. | Cystathione beta-lyase. | 0.487 |
SDK91084.1 | SDL10252.1 | SAMN04487971_10465 | SAMN04487971_106110 | 5,10-methylenetetrahydrofolate reductase (NAD(P)); Belongs to the methylenetetrahydrofolate reductase family. | O-succinylhomoserine sulfhydrylase. | 0.948 |
SDK91084.1 | SDL12303.1 | SAMN04487971_10465 | SAMN04487971_106179 | 5,10-methylenetetrahydrofolate reductase (NAD(P)); Belongs to the methylenetetrahydrofolate reductase family. | Cysteine synthase A. | 0.608 |
SDK91084.1 | SDL25113.1 | SAMN04487971_10465 | SAMN04487971_10821 | 5,10-methylenetetrahydrofolate reductase (NAD(P)); Belongs to the methylenetetrahydrofolate reductase family. | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.999 |
SDK91084.1 | SDL28238.1 | SAMN04487971_10465 | SAMN04487971_108121 | 5,10-methylenetetrahydrofolate reductase (NAD(P)); Belongs to the methylenetetrahydrofolate reductase family. | Homoserine dehydrogenase. | 0.777 |
SDK91084.1 | SDL28535.1 | SAMN04487971_10465 | SAMN04487971_108129 | 5,10-methylenetetrahydrofolate reductase (NAD(P)); Belongs to the methylenetetrahydrofolate reductase family. | O-acetylhomoserine sulfhydrylase. | 0.541 |
SDK91084.1 | ahcY | SAMN04487971_10465 | SAMN04487971_101146 | 5,10-methylenetetrahydrofolate reductase (NAD(P)); Belongs to the methylenetetrahydrofolate reductase family. | Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. | 0.699 |
SDK91084.1 | ilvA | SAMN04487971_10465 | SAMN04487971_107196 | 5,10-methylenetetrahydrofolate reductase (NAD(P)); Belongs to the methylenetetrahydrofolate reductase family. | L-threonine ammonia-lyase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | 0.465 |
SDK91084.1 | metAA | SAMN04487971_10465 | SAMN04487971_103205 | 5,10-methylenetetrahydrofolate reductase (NAD(P)); Belongs to the methylenetetrahydrofolate reductase family. | Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family. | 0.941 |
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