STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL15910.1GntR family transcriptional regulator, histidine utilization repressor. (246 aa)    
Predicted Functional Partners:
SDL15882.1
Formimidoylglutamate deiminase.
 
    0.934
SDL88904.1
Formimidoylglutamate deiminase.
 
    0.725
SDL15850.1
Imidazolonepropionase.
 
 
 0.721
SDL92873.1
Formiminoglutamase.
 
 
 0.717
SDL95376.1
Formiminoglutamase.
 
 
 0.712
SDL88860.1
Amidohydrolase.
 
 
 0.685
SDL95308.1
Imidazolonepropionase.
 
 
 0.573
SDL92806.1
Imidazolonepropionase.
 
 
 0.554
SDL50486.1
Hypothetical protein.
 
  
 0.530
SDL71381.1
Hypothetical protein.
 
  
 0.530
Your Current Organism:
Paracoccus chinensis
NCBI taxonomy Id: 525640
Other names: CGMCC 1.7655, NBRC 104937, P. chinensis, Paracoccus chinensis Li et al. 2009, Paracoccus sp. KS-11, strain KS-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.