STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL17404.1Chitin deacetylase. (467 aa)    
Predicted Functional Partners:
SDL11457.1
5-hydroxyisourate hydrolase; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
 
 0.977
SDL11437.1
Ureidoglycolate lyase.
 
 
  0.943
SDK47786.1
Cyclic beta-1,2-glucan synthetase.
  
 
 0.940
SDL11486.1
Uncharacterized membrane protein.
 
    0.885
SDL11587.1
Molybdenum cofactor sulfurylase.
 
  
  0.836
SDL11562.1
Xanthine dehydrogenase, molybdenum binding subunit apoprotein.
 
     0.828
SDK84176.1
N-carbamoyl-L-amino-acid hydrolase.
  
 0.819
SDL33235.1
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase.
  
 
 0.810
SDL59691.1
Cellulose synthase (UDP-forming).
  
 
 0.810
SDL11532.1
Xanthine dehydrogenase small subunit.
 
     0.806
Your Current Organism:
Paracoccus chinensis
NCBI taxonomy Id: 525640
Other names: CGMCC 1.7655, NBRC 104937, P. chinensis, Paracoccus chinensis Li et al. 2009, Paracoccus sp. KS-11, strain KS-11
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