STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL36954.1Phage portal protein, lambda family. (502 aa)    
Predicted Functional Partners:
SDL36882.1
Phage terminase, large subunit GpA.
 
  
 0.952
SDL37013.1
Predicted phage recombinase, RecA/RadA family.
 
    0.846
SDL09323.1
Phage terminase, large subunit GpA.
 
  
 0.810
SDL36844.1
Hypothetical protein.
  
  
 0.791
SDL36984.1
Prohead serine protease.
 
    0.786
SDL09184.1
Phage prohead protease, HK97 family.
 
    0.779
SDL37078.1
Hypothetical protein.
 
     0.779
SDL37049.1
Hypothetical protein.
 
     0.777
SDL36913.1
Hypothetical protein.
       0.773
SDL37101.1
Hypothetical protein.
 
     0.772
Your Current Organism:
Paracoccus chinensis
NCBI taxonomy Id: 525640
Other names: CGMCC 1.7655, NBRC 104937, P. chinensis, Paracoccus chinensis Li et al. 2009, Paracoccus sp. KS-11, strain KS-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.