STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL42994.1Hypothetical protein. (165 aa)    
Predicted Functional Partners:
SDL42963.1
Recombinase.
 
     0.877
SDL80664.1
Resolvase, N terminal domain.
 
     0.776
SDL80638.1
Recombinase.
 
     0.772
SDL80727.1
ParB-like nuclease domain-containing protein.
  
     0.747
SDL36954.1
Phage portal protein, lambda family.
  
     0.659
SDL37078.1
Hypothetical protein.
  
     0.643
SDL37049.1
Hypothetical protein.
  
     0.624
SDL37101.1
Hypothetical protein.
  
     0.549
SDL37136.1
Hypothetical protein.
  
     0.548
SDL37162.1
Hypothetical protein.
  
     0.545
Your Current Organism:
Paracoccus chinensis
NCBI taxonomy Id: 525640
Other names: CGMCC 1.7655, NBRC 104937, P. chinensis, Paracoccus chinensis Li et al. 2009, Paracoccus sp. KS-11, strain KS-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.