Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDK81331.1 | SDL34697.1 | SAMN04487971_103180 | SAMN04487971_10964 | Cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE. | Cytochrome c. | 0.577 |
SDK81331.1 | SDL70438.1 | SAMN04487971_103180 | SAMN04487971_1198 | Cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE. | Protein SCO1/2. | 0.669 |
SDK81331.1 | SDL70495.1 | SAMN04487971_103180 | SAMN04487971_11910 | Cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE. | Protein SCO1/2. | 0.670 |
SDK85381.1 | SDL34697.1 | SAMN04487971_103301 | SAMN04487971_10964 | Cytochrome c. | Cytochrome c. | 0.917 |
SDK85381.1 | SDL70438.1 | SAMN04487971_103301 | SAMN04487971_1198 | Cytochrome c. | Protein SCO1/2. | 0.798 |
SDK85381.1 | SDL70495.1 | SAMN04487971_103301 | SAMN04487971_11910 | Cytochrome c. | Protein SCO1/2. | 0.773 |
SDK85381.1 | ctaB | SAMN04487971_103301 | SAMN04487971_102151 | Cytochrome c. | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group; Belongs to the UbiA prenyltransferase family. Protoheme IX farnesyltransferase subfamily. | 0.463 |
SDK85381.1 | ctaG | SAMN04487971_103301 | SAMN04487971_102153 | Cytochrome c. | Cytochrome c oxidase assembly protein subunit 11; Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I; Belongs to the COX11/CtaG family. | 0.933 |
SDL20259.1 | SDL70438.1 | SAMN04487971_107146 | SAMN04487971_1198 | Thiol-disulfide isomerase or thioredoxin. | Protein SCO1/2. | 0.869 |
SDL20259.1 | SDL70495.1 | SAMN04487971_107146 | SAMN04487971_11910 | Thiol-disulfide isomerase or thioredoxin. | Protein SCO1/2. | 0.871 |
SDL34697.1 | SDK81331.1 | SAMN04487971_10964 | SAMN04487971_103180 | Cytochrome c. | Cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE. | 0.577 |
SDL34697.1 | SDK85381.1 | SAMN04487971_10964 | SAMN04487971_103301 | Cytochrome c. | Cytochrome c. | 0.917 |
SDL34697.1 | SDL70438.1 | SAMN04487971_10964 | SAMN04487971_1198 | Cytochrome c. | Protein SCO1/2. | 0.736 |
SDL34697.1 | SDL70495.1 | SAMN04487971_10964 | SAMN04487971_11910 | Cytochrome c. | Protein SCO1/2. | 0.702 |
SDL34697.1 | ctaB | SAMN04487971_10964 | SAMN04487971_102151 | Cytochrome c. | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group; Belongs to the UbiA prenyltransferase family. Protoheme IX farnesyltransferase subfamily. | 0.463 |
SDL34697.1 | ctaG | SAMN04487971_10964 | SAMN04487971_102153 | Cytochrome c. | Cytochrome c oxidase assembly protein subunit 11; Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I; Belongs to the COX11/CtaG family. | 0.854 |
SDL70438.1 | SDK81331.1 | SAMN04487971_1198 | SAMN04487971_103180 | Protein SCO1/2. | Cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE. | 0.669 |
SDL70438.1 | SDK85381.1 | SAMN04487971_1198 | SAMN04487971_103301 | Protein SCO1/2. | Cytochrome c. | 0.798 |
SDL70438.1 | SDL20259.1 | SAMN04487971_1198 | SAMN04487971_107146 | Protein SCO1/2. | Thiol-disulfide isomerase or thioredoxin. | 0.869 |
SDL70438.1 | SDL34697.1 | SAMN04487971_1198 | SAMN04487971_10964 | Protein SCO1/2. | Cytochrome c. | 0.736 |
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