STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL78986.1Sulfonate transport system ATP-binding protein. (257 aa)    
Predicted Functional Partners:
SDL79012.1
ABC-type nitrate/sulfonate/bicarbonate transport system, substrate-binding protein.
 
 
  0.992
SDL79044.1
Sulfonate transport system permease protein.
 
  0.956
SDL41781.1
NitT/TauT family transport system permease protein.
 
 
  0.832
SDL62567.1
NitT/TauT family transport system permease protein.
 
 
  0.827
SDL79074.1
FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family.
 
 
  0.798
SDK48913.1
ATP-binding cassette, subfamily B.
 
    
0.788
SDL56880.1
NitT/TauT family transport system permease protein.
 
 
 0.766
SDL56830.1
NitT/TauT family transport system permease protein.
 
 0.757
SDL79106.1
FMN reductase.
  
 
  0.685
SDL11913.1
Putative hydroxymethylpyrimidine transport system permease protein.
 
  0.680
Your Current Organism:
Paracoccus chinensis
NCBI taxonomy Id: 525640
Other names: CGMCC 1.7655, NBRC 104937, P. chinensis, Paracoccus chinensis Li et al. 2009, Paracoccus sp. KS-11, strain KS-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.