STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL89102.1Vanillate O-demethylase monooxygenase subunit. (346 aa)    
Predicted Functional Partners:
SDK78978.1
Benzoate/toluate 1,2-dioxygenase beta subunit.
 
 0.968
SDL89071.1
Ferredoxin-NADP reductase.
 
 
 0.953
SDL89129.1
LysR family transcriptional regulator, glycine cleavage system transcriptional activator; Belongs to the LysR transcriptional regulatory family.
 
     0.815
SDK78947.1
Benzoate/toluate 1,2-dioxygenase reductase subunit.
 
 
 0.720
SDL75518.1
Ferredoxin-NADP reductase.
  
 
 0.684
SDL53251.1
Sarcosine oxidase subunit alpha; Belongs to the GcvT family.
  
 
 0.653
SDL75376.1
Hypothetical protein.
  
 
 0.634
SDL72710.1
Sulfite reductase (NADPH) flavoprotein alpha-component.
  
  
  0.617
SDL40278.1
Oxidoreductase NAD-binding domain-containing protein.
  
  
  0.609
SDL89162.1
Peptide/nickel transport system substrate-binding protein.
 
     0.549
Your Current Organism:
Paracoccus chinensis
NCBI taxonomy Id: 525640
Other names: CGMCC 1.7655, NBRC 104937, P. chinensis, Paracoccus chinensis Li et al. 2009, Paracoccus sp. KS-11, strain KS-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.