Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDK78947.1 | SDL50777.1 | SAMN04487971_103108 | SAMN04487971_11212 | Benzoate/toluate 1,2-dioxygenase reductase subunit. | Enterobactin synthetase component F. | 0.404 |
SDK78947.1 | SDL75518.1 | SAMN04487971_103108 | SAMN04487971_12215 | Benzoate/toluate 1,2-dioxygenase reductase subunit. | Ferredoxin-NADP reductase. | 0.565 |
SDK78947.1 | SDL89071.1 | SAMN04487971_103108 | SAMN04487971_1348 | Benzoate/toluate 1,2-dioxygenase reductase subunit. | Ferredoxin-NADP reductase. | 0.579 |
SDK78947.1 | SDL92082.1 | SAMN04487971_103108 | SAMN04487971_1405 | Benzoate/toluate 1,2-dioxygenase reductase subunit. | Mobilisation protein (MobC). | 0.474 |
SDK79327.1 | SDL03204.1 | SAMN04487971_103120 | SAMN04487971_105179 | NAD(P)H-dependent FMN reductase. | NAD(P)H-dependent FMN reductase. | 0.513 |
SDK79327.1 | SDL92082.1 | SAMN04487971_103120 | SAMN04487971_1405 | NAD(P)H-dependent FMN reductase. | Mobilisation protein (MobC). | 0.439 |
SDL03204.1 | SDK79327.1 | SAMN04487971_105179 | SAMN04487971_103120 | NAD(P)H-dependent FMN reductase. | NAD(P)H-dependent FMN reductase. | 0.513 |
SDL03204.1 | SDL92082.1 | SAMN04487971_105179 | SAMN04487971_1405 | NAD(P)H-dependent FMN reductase. | Mobilisation protein (MobC). | 0.439 |
SDL50777.1 | SDK78947.1 | SAMN04487971_11212 | SAMN04487971_103108 | Enterobactin synthetase component F. | Benzoate/toluate 1,2-dioxygenase reductase subunit. | 0.404 |
SDL50777.1 | SDL75518.1 | SAMN04487971_11212 | SAMN04487971_12215 | Enterobactin synthetase component F. | Ferredoxin-NADP reductase. | 0.404 |
SDL50777.1 | SDL89071.1 | SAMN04487971_11212 | SAMN04487971_1348 | Enterobactin synthetase component F. | Ferredoxin-NADP reductase. | 0.404 |
SDL50777.1 | SDL92082.1 | SAMN04487971_11212 | SAMN04487971_1405 | Enterobactin synthetase component F. | Mobilisation protein (MobC). | 0.756 |
SDL64226.1 | SDL92082.1 | SAMN04487971_11616 | SAMN04487971_1405 | Hypothetical protein. | Mobilisation protein (MobC). | 0.533 |
SDL75518.1 | SDK78947.1 | SAMN04487971_12215 | SAMN04487971_103108 | Ferredoxin-NADP reductase. | Benzoate/toluate 1,2-dioxygenase reductase subunit. | 0.565 |
SDL75518.1 | SDL50777.1 | SAMN04487971_12215 | SAMN04487971_11212 | Ferredoxin-NADP reductase. | Enterobactin synthetase component F. | 0.404 |
SDL75518.1 | SDL89071.1 | SAMN04487971_12215 | SAMN04487971_1348 | Ferredoxin-NADP reductase. | Ferredoxin-NADP reductase. | 0.647 |
SDL75518.1 | SDL92082.1 | SAMN04487971_12215 | SAMN04487971_1405 | Ferredoxin-NADP reductase. | Mobilisation protein (MobC). | 0.474 |
SDL79106.1 | SDL92082.1 | SAMN04487971_12435 | SAMN04487971_1405 | FMN reductase. | Mobilisation protein (MobC). | 0.439 |
SDL89071.1 | SDK78947.1 | SAMN04487971_1348 | SAMN04487971_103108 | Ferredoxin-NADP reductase. | Benzoate/toluate 1,2-dioxygenase reductase subunit. | 0.579 |
SDL89071.1 | SDL50777.1 | SAMN04487971_1348 | SAMN04487971_11212 | Ferredoxin-NADP reductase. | Enterobactin synthetase component F. | 0.404 |
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