STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL92806.1Imidazolonepropionase. (344 aa)    
Predicted Functional Partners:
hutH
Histidine ammonia-lyase.
 
  
 0.982
hutU
Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
 
 
 0.978
hutU-2
Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
 
 
 0.978
hutH-2
Histidine ammonia-lyase.
 
  
 0.923
SDL92873.1
Formiminoglutamase.
 
  
 0.891
SDL15882.1
Formimidoylglutamate deiminase.
 
  
  0.820
SDL88904.1
Formimidoylglutamate deiminase.
 
  
  0.819
SDL92915.1
CoA:oxalate CoA-transferase; Belongs to the CoA-transferase III family.
       0.774
SDL92948.1
butyryl-CoA dehydrogenase.
       0.774
SDL88931.1
Transcriptional regulator, GntR family.
 
 
 0.578
Your Current Organism:
Paracoccus chinensis
NCBI taxonomy Id: 525640
Other names: CGMCC 1.7655, NBRC 104937, P. chinensis, Paracoccus chinensis Li et al. 2009, Paracoccus sp. KS-11, strain KS-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.