STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EV44_g4788Putative trna (Uracil-5-)-methyltransferase trm9. (236 aa)    
Predicted Functional Partners:
EV44_g2329
20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family.
   
 0.855
EV44_g1829
Putative pre-rrna processing protein tsr1.
   
  0.789
EV44_g4720
Putative rrna processing protein bystin.
   
 0.777
EV44_g5662
Putative histone h4 protein.
    
 0.777
EV44_g6489
Putative pre-rrna-processing protein pno1.
   
  0.774
EV44_g1539
Putative 37s ribosomal protein s5; Belongs to the universal ribosomal protein uS5 family.
    
 0.757
EV44_g1544
Putative 40s ribosomal protein s2; Belongs to the universal ribosomal protein uS5 family.
    
 0.757
EV44_g2957
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
    
  0.755
EV44_g1767
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
    
  0.755
EV44_g1195
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
    
  0.754
Your Current Organism:
Erysiphe necator
NCBI taxonomy Id: 52586
Other names: E. necator, Uncinula necator, grape powdery mildew
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.