STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSR3Ribosome biogenesis protein TSR3; Ribosome biogenesis protein required for processing 35S pre- rRNA at site D; Belongs to the TSR3 family. (391 aa)    
Predicted Functional Partners:
EV44_g1621
Putative pre-rrna-processing protein tsr2.
   
  
 0.650
EV44_g4903
Putative serine threonine-protein kinase bud32.
 
      0.620
EV44_g4938
Putative methyltransferase domain-containing protein.
   
  
 0.576
EV44_g2329
20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family.
   
  
 0.525
EV44_g0933
Methyltransferase-like protein; Belongs to the methyltransferase superfamily. METL family.
 
 
  
 0.516
EV44_g3692
Putative trna-dihydrouridine synthase c.
   
  
 0.480
EV44_g3024
Putative trna-dihydrouridine synthase 1.
   
  
 0.480
EV44_g2676
Putative low temperature viability protein.
   
  
 0.478
EV44_g4706
Putative nucleolar essential protein 1.
   
  
 0.472
EV44_g2946
Putative wd repeat protein.
   
  
 0.472
Your Current Organism:
Erysiphe necator
NCBI taxonomy Id: 52586
Other names: E. necator, Uncinula necator, grape powdery mildew
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