STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EV44_g2933Putative zinc finger protein dhhc domain containing protein. (909 aa)    
Predicted Functional Partners:
EV44_g5336
Small nuclear ribonucleoprotein Sm D2.
    
 0.799
EV44_g4430
Putative small nuclear ribonucleoprotein sm d1.
    
 0.780
EV44_g1903
Putative survival motor neuron-like protein 1.
    
 0.769
EV44_g3068
Putative crossover junction endonuclease mus81.
    
 0.758
EV44_g2540
Small nuclear ribonucleoprotein G.
    
  0.721
EV44_g4786
Putative lsm domain-containing protein.
    
  0.697
EV44_g5977
Putative duf866-domain-containing protein.
    
  0.697
EV44_g1891
Putative mus38-like protein.
    
 0.684
FEN1
Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...]
    
 0.683
EV44_g2291
Putative wd domain-containing protein.
    
 0.677
Your Current Organism:
Erysiphe necator
NCBI taxonomy Id: 52586
Other names: E. necator, Uncinula necator, grape powdery mildew
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.