STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EV44_g6398Putative transcription initiation factor subunit taf1. (1090 aa)    
Predicted Functional Partners:
EV44_g4936
Putative wd domain-containing protein.
    
 0.999
EV44_g2706
Putative transcription initiation factor tfiid subunit 12.
    
 0.999
EV44_g2150
Putative transcription initiation factor tfiid subunit 6.
    
 0.999
EV44_g4682
Putative TFIId subunit.
   
 0.999
EV44_g2932
Putative transcription initiation factor tfiid subunit 13.
    
 0.999
EV44_g1327
Putative phd finger domain protein.
    
 0.999
EV44_g6347
Putative transcription initiation factor tfiid subunit.
    
 0.999
EV44_g4808
Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]
    
 0.999
EV44_g5839
Putative transcription initiation factor tfiid subunit 7.
    
 0.999
EV44_g2722
Putative transcription initiation factor iib.
    
 0.995
Your Current Organism:
Erysiphe necator
NCBI taxonomy Id: 52586
Other names: E. necator, Uncinula necator, grape powdery mildew
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.