STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EV44_g5274Putative rna-binding protein. (707 aa)    
Predicted Functional Partners:
EV44_g4840
Putative p-loop containing nucleoside triphosphate hydrolase.
   
 0.925
EV44_g2718
RNA helicase.
    
 0.905
EV44_g1897
Putative pre-mrna splicing factor atp-dependent rna helicase prp16.
    
 0.900
EV44_g6163
Putative splicing factor u2af 50 kDa subunit.
   
 
 0.897
EV44_g2509
U3 small nucleolar RNA-associated protein 22.
    
 
 0.846
EV44_g2046
Putative g-patch rna maturation protein.
    
 
 0.842
EV44_g6265
Putative u3 snornp protein.
    
 
 0.842
EV44_g5121
Putative pre-rrna processing protein.
   
   0.840
EV44_g1277
Putative glycerol defect protein 1 suppressor.
   
   0.840
EV44_g4720
Putative rrna processing protein bystin.
    
 
 0.839
Your Current Organism:
Erysiphe necator
NCBI taxonomy Id: 52586
Other names: E. necator, Uncinula necator, grape powdery mildew
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.