STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EV44_g2180Putative nuclear localization sequence-binding protein. (670 aa)    
Predicted Functional Partners:
EV44_g2655
Putative rrna methyltransferase nop1.
   
 
 0.997
EV44_g4529
Putative nucleolar protein 56.
   
 
 0.997
EV44_g2046
Putative g-patch rna maturation protein.
   
 
 0.980
EV44_g0683
Putative pre-rrna-processing protein esf2.
   
   0.979
EV44_g1760
Putative histone-arginine methyltransferase carm1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
   
 
 0.948
EV44_g2601
Putative nucleolar gtp-binding protein 2.
   
 
 0.948
EV44_g4840
Putative p-loop containing nucleoside triphosphate hydrolase.
   
 
 0.930
EV44_g1863
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
   0.924
EV44_g2157
H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.
   
 
 0.924
EV44_g4726
Putative transcription factor utp21.
   
   0.923
Your Current Organism:
Erysiphe necator
NCBI taxonomy Id: 52586
Other names: E. necator, Uncinula necator, grape powdery mildew
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