node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Dbac_0864 | Dbac_0865 | Dbac_0864 | Dbac_0865 | TIGRFAM: GTP-binding protein TypA; small GTP- binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor G domain protein; elongation factor Tu domain 2 protein; KEGG: dde:Dde_1533 GTP-binding protein TypA. | PFAM: FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; KEGG: dps:DP0272 hypothetical protein. | 0.786 |
Dbac_0864 | Dbac_1640 | Dbac_0864 | Dbac_1640 | TIGRFAM: GTP-binding protein TypA; small GTP- binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor G domain protein; elongation factor Tu domain 2 protein; KEGG: dde:Dde_1533 GTP-binding protein TypA. | PFAM: ferredoxin-dependent glutamate synthase; glutamate synthase alpha subunit domain protein; glutamine amidotransferase class-II; KEGG: gsu:GSU3450 glutamate synthase-related protein. | 0.641 |
Dbac_0864 | der | Dbac_0864 | Dbac_0192 | TIGRFAM: GTP-binding protein TypA; small GTP- binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor G domain protein; elongation factor Tu domain 2 protein; KEGG: dde:Dde_1533 GTP-binding protein TypA. | Small GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 0.647 |
Dbac_0864 | guaA | Dbac_0864 | Dbac_2496 | TIGRFAM: GTP-binding protein TypA; small GTP- binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor G domain protein; elongation factor Tu domain 2 protein; KEGG: dde:Dde_1533 GTP-binding protein TypA. | GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP. | 0.810 |
Dbac_0864 | rplA | Dbac_0864 | Dbac_2784 | TIGRFAM: GTP-binding protein TypA; small GTP- binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor G domain protein; elongation factor Tu domain 2 protein; KEGG: dde:Dde_1533 GTP-binding protein TypA. | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 0.781 |
Dbac_0864 | rplD | Dbac_0864 | Dbac_2773 | TIGRFAM: GTP-binding protein TypA; small GTP- binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor G domain protein; elongation factor Tu domain 2 protein; KEGG: dde:Dde_1533 GTP-binding protein TypA. | Ribosomal protein L4/L1e; Forms part of the polypeptide exit tunnel. | 0.636 |
Dbac_0864 | rpoB | Dbac_0864 | Dbac_2781 | TIGRFAM: GTP-binding protein TypA; small GTP- binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor G domain protein; elongation factor Tu domain 2 protein; KEGG: dde:Dde_1533 GTP-binding protein TypA. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.636 |
Dbac_0864 | rpsI | Dbac_0864 | Dbac_0048 | TIGRFAM: GTP-binding protein TypA; small GTP- binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor G domain protein; elongation factor Tu domain 2 protein; KEGG: dde:Dde_1533 GTP-binding protein TypA. | PFAM: ribosomal protein S9; KEGG: dde:Dde_2608 30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. | 0.652 |
Dbac_0864 | tsf | Dbac_0864 | Dbac_2377 | TIGRFAM: GTP-binding protein TypA; small GTP- binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor G domain protein; elongation factor Tu domain 2 protein; KEGG: dde:Dde_1533 GTP-binding protein TypA. | Translation elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family. | 0.664 |
Dbac_0864 | ychF | Dbac_0864 | Dbac_0442 | TIGRFAM: GTP-binding protein TypA; small GTP- binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor G domain protein; elongation factor Tu domain 2 protein; KEGG: dde:Dde_1533 GTP-binding protein TypA. | GTP-binding protein YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. | 0.654 |
Dbac_0865 | Dbac_0864 | Dbac_0865 | Dbac_0864 | PFAM: FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; KEGG: dps:DP0272 hypothetical protein. | TIGRFAM: GTP-binding protein TypA; small GTP- binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor G domain protein; elongation factor Tu domain 2 protein; KEGG: dde:Dde_1533 GTP-binding protein TypA. | 0.786 |
Dbac_1640 | Dbac_0864 | Dbac_1640 | Dbac_0864 | PFAM: ferredoxin-dependent glutamate synthase; glutamate synthase alpha subunit domain protein; glutamine amidotransferase class-II; KEGG: gsu:GSU3450 glutamate synthase-related protein. | TIGRFAM: GTP-binding protein TypA; small GTP- binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor G domain protein; elongation factor Tu domain 2 protein; KEGG: dde:Dde_1533 GTP-binding protein TypA. | 0.641 |
Dbac_1640 | guaA | Dbac_1640 | Dbac_2496 | PFAM: ferredoxin-dependent glutamate synthase; glutamate synthase alpha subunit domain protein; glutamine amidotransferase class-II; KEGG: gsu:GSU3450 glutamate synthase-related protein. | GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP. | 0.808 |
Dbac_1640 | rpoB | Dbac_1640 | Dbac_2781 | PFAM: ferredoxin-dependent glutamate synthase; glutamate synthase alpha subunit domain protein; glutamine amidotransferase class-II; KEGG: gsu:GSU3450 glutamate synthase-related protein. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.545 |
der | Dbac_0864 | Dbac_0192 | Dbac_0864 | Small GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | TIGRFAM: GTP-binding protein TypA; small GTP- binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor G domain protein; elongation factor Tu domain 2 protein; KEGG: dde:Dde_1533 GTP-binding protein TypA. | 0.647 |
der | guaA | Dbac_0192 | Dbac_2496 | Small GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP. | 0.532 |
der | rplA | Dbac_0192 | Dbac_2784 | Small GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 0.622 |
der | tsf | Dbac_0192 | Dbac_2377 | Small GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | Translation elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family. | 0.497 |
der | ychF | Dbac_0192 | Dbac_0442 | Small GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | GTP-binding protein YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. | 0.454 |
guaA | Dbac_0864 | Dbac_2496 | Dbac_0864 | GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP. | TIGRFAM: GTP-binding protein TypA; small GTP- binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor G domain protein; elongation factor Tu domain 2 protein; KEGG: dde:Dde_1533 GTP-binding protein TypA. | 0.810 |