STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dbac_1366PFAM: filamentation induced by cAMP protein Fic; KEGG: pol:Bpro_4758 filamentation induced by cAMP protein Fic. (371 aa)    
Predicted Functional Partners:
Dbac_0753
PFAM: filamentation induced by cAMP protein Fic; KEGG: ppf:Pput_0676 filamentation induced by cAMP protein Fic.
  
     0.699
Dbac_1233
PFAM: filamentation induced by cAMP protein Fic; KEGG: dvu:DVU2042 Fic family protein.
 
     0.652
Dbac_3106
PFAM: filamentation induced by cAMP protein Fic; KEGG: pna:Pnap_3262 filamentation induced by cAMP protein Fic.
 
     0.574
Dbac_1367
Transcriptional regulator/antitoxin, MazE; PFAM: SpoVT/AbrB domain protein; KEGG: gur:Gura_1478 transcriptional regulator/antitoxin, MazE.
       0.548
Dbac_2317
KEGG: cph:Cpha266_1213 AAA family ATPase.
 
     0.527
Dbac_0182
Putative transcriptional regulator; PFAM: AAA-4 family protein; KEGG: tdn:Suden_0947 putative transcriptional regulator.
 
     0.488
Dbac_1365
KEGG: dde:Dde_0659 Fis family transcriptional regulator; TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; PAS fold-4 domain protein; PAS fold domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; PAS domain containing protein; PAC repeat-containing protein.
       0.419
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
    
   0.407
Your Current Organism:
Desulfomicrobium baculatum
NCBI taxonomy Id: 525897
Other names: D. baculatum DSM 4028, Desulfomicrobium baculatum DSM 4028, Desulfomicrobium baculatum str. DSM 4028, Desulfomicrobium baculatum strain DSM 4028
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.