STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dbac_1663PFAM: Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein; KEGG: nha:Nham_3536 Sel1. (236 aa)    
Predicted Functional Partners:
Dbac_1661
KEGG: gbm:Gbem_1158 hypothetical protein.
 
   
 0.906
Dbac_1665
KEGG: hch:HCH_02790 hypothetical protein.
 
     0.888
Dbac_1666
PFAM: 17 kDa surface antigen; KEGG: hch:HCH_02788 hypothetical protein.
 
     0.888
Dbac_1670
PFAM: von Willebrand factor type A; KEGG: bav:BAV0798 exported protein.
 
     0.882
Dbac_1667
KEGG: ent:Ent638_4233 hypothetical protein.
 
     0.875
Dbac_1668
PFAM: protein of unknown function DUF214; KEGG: bav:BAV0796 ABC transporter, transmembrane protein.
 
     0.874
Dbac_1669
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pau:PA14_00860 putative ATP-binding component of ABC transporter.
 
     0.777
Dbac_1662
Hypothetical protein.
       0.773
Dbac_1664
PFAM: peptidase S41; SMART: peptidase S41; KEGG: ace:Acel_1729 carboxyl-terminal protease.
 
     0.764
Dbac_3069
Hypothetical protein; KEGG: kra:Krad_2018 MerR family transcriptional regulator.
  
     0.758
Your Current Organism:
Desulfomicrobium baculatum
NCBI taxonomy Id: 525897
Other names: D. baculatum DSM 4028, Desulfomicrobium baculatum DSM 4028, Desulfomicrobium baculatum str. DSM 4028, Desulfomicrobium baculatum strain DSM 4028
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.