Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Dbac_2001KEGG: chy:CHY_1329 aldehyde ferredoxin oxidoreductase, tungsten-containing; PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase; SMART: Aldehyde ferredoxin oxidoreductase. (587 aa)    
Predicted Functional Partners:
Dbac_0166
PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: hmo:HM1_1744 proton-translocating NADH- ubiquinone oxidoreductase, chain F.
   
 
 0.755
Dbac_0985
Molybdenum cofactor synthesis domain protein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
 
   
 0.734
Dbac_3402
KEGG: dps:DP0331 hypothetical protein.
 
   
 0.719
Dbac_2000
TIGRFAM: 4-aminobutyrate aminotransferase; PFAM: aminotransferase class-III; KEGG: gur:Gura_0119 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
     0.683
Dbac_2008
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: pth:PTH_0609 Fe-S-cluster-containing hydrogenase components 2.
   
 
 0.666
Dbac_3403
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dps:DP0330 ABC transporter permease.
 
   
 0.632
Dbac_2002
Spermidine/putrescine ABC transporter ATPase subunit; KEGG: scl:sce9160 spermidine/putrescine transport system ATP-binding protein; TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
       0.625
Dbac_2003
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cyb:CYB_1299 spermidine/putrescine ABC transporter, permease protein.
       0.625
Dbac_2004
Ornithine carbamoyltransferase; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cyb:CYB_2209 spermidine/putrescine ABC transporter, permease protein PotC.
       0.625
Dbac_2005
Extracellular solute-binding protein family 1; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.
       0.625
Your Current Organism:
Desulfomicrobium baculatum
NCBI taxonomy Id: 525897
Other names: D. baculatum DSM 4028, Desulfomicrobium baculatum DSM 4028, Desulfomicrobium baculatum str. DSM 4028, Desulfomicrobium baculatum strain DSM 4028
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