Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Dbac_2014PFAM: aminotransferase class I and II; KEGG: aau:AAur_1949 aspartate aminotransferase. (398 aa)    
Predicted Functional Partners:
Dbac_1640
PFAM: ferredoxin-dependent glutamate synthase; glutamate synthase alpha subunit domain protein; glutamine amidotransferase class-II; KEGG: gsu:GSU3450 glutamate synthase-related protein.
  
 
 0.949
Dbac_2809
PFAM: prephenate dehydratase; amino acid-binding ACT domain protein; Chorismate mutase; KEGG: dvu:DVU0462 chorismate mutase/prephenate dehydratase.
 
 
 0.943
Dbac_3209
Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family.
  
 0.928
Dbac_2987
PFAM: aminotransferase class I and II; KEGG: dde:Dde_3596 L-aspartate aminotransferase.
  
  
 
0.921
Dbac_0426
TIGRFAM: cystathionine beta-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate- dependent protein; KEGG: dps:DP2948 cystathionine beta-lyase.
  
 
 0.920
Dbac_1638
TIGRFAM: cysteine synthase A; cysteine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: mbb:BCG_2356 putative cysteine synthase A cysK1.
  
 
 0.919
pyrB
TIGRFAM: aspartate carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; KEGG: dvu:DVU2901 aspartate carbamoyltransferase catalytic subunit; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
 
  
  0.919
argG
KEGG: dde:Dde_2531 argininosuccinate synthase; TIGRFAM: argininosuccinate synthase; PFAM: argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
  
 0.914
Dbac_3303
PFAM: aminotransferase class I and II; KEGG: dvl:Dvul_2140 aspartate aminotransferase.
  
  
 
0.914
Dbac_1371
PFAM: ferredoxin-dependent glutamate synthase; 4Fe- 4S ferredoxin iron-sulfur binding domain protein; KEGG: dvl:Dvul_0103 ferredoxin-dependent glutamate synthase; Belongs to the glutamate synthase family.
  
 
 0.911
Your Current Organism:
Desulfomicrobium baculatum
NCBI taxonomy Id: 525897
Other names: D. baculatum DSM 4028, Desulfomicrobium baculatum DSM 4028, Desulfomicrobium baculatum str. DSM 4028, Desulfomicrobium baculatum strain DSM 4028
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