STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dbac_3208PFAM: Extracellular ligand-binding receptor; KEGG: dvl:Dvul_2254 extracellular ligand-binding receptor. (376 aa)    
Predicted Functional Partners:
Dbac_3206
PFAM: inner-membrane translocator; KEGG: dde:Dde_0260 branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.993
Dbac_3207
PFAM: inner-membrane translocator; KEGG: dde:Dde_0259 branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.993
Dbac_3205
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dde:Dde_0261 ATPase.
 
  
 0.920
Dbac_3204
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dvl:Dvul_2250 ABC transporter related.
 
  
 0.902
Dbac_2500
PFAM: inner-membrane translocator; KEGG: dvl:Dvul_2395 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.828
Dbac_2501
PFAM: inner-membrane translocator; KEGG: dde:Dde_0611 high-affinity branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.818
Dbac_0612
PFAM: inner-membrane translocator; KEGG: lip:LI0497 branched chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.794
Dbac_0521
PFAM: inner-membrane translocator; KEGG: dvl:Dvul_0563 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.791
Dbac_2499
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dde:Dde_0609 ATPase.
 
  
 0.717
Dbac_0613
PFAM: inner-membrane translocator; KEGG: lip:LI0498 branched chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.703
Your Current Organism:
Desulfomicrobium baculatum
NCBI taxonomy Id: 525897
Other names: D. baculatum DSM 4028, Desulfomicrobium baculatum DSM 4028, Desulfomicrobium baculatum str. DSM 4028, Desulfomicrobium baculatum strain DSM 4028
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.