STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dbac_3335KEGG: dvl:Dvul_2533 hypothetical protein. (87 aa)    
Predicted Functional Partners:
Dbac_0785
KEGG: dvu:DVU1034 hypothetical protein.
  
     0.765
Dbac_3035
KEGG: dvl:Dvul_2535 hypothetical protein.
 
     0.765
Dbac_3006
KEGG: dde:Dde_3184 hypothetical protein.
  
     0.735
trpF-2
PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); KEGG: dvl:Dvul_0752 phosphoribosylanthranilate isomerase; Belongs to the TrpF family.
       0.708
Dbac_2703
KEGG: dvl:Dvul_0169 hypothetical protein.
  
     0.687
Dbac_2492
KEGG: dde:Dde_1466 putative lipoprotein.
  
     0.686
Dbac_3044
KEGG: dvu:DVU0400 hypothetical protein.
 
     0.677
Dbac_1504
KEGG: dvu:DVU1952 hypothetical protein.
  
     0.673
Dbac_0564
KEGG: dol:Dole_0304 hypothetical protein.
  
     0.665
Dbac_3122
KEGG: dvu:DVU0455 hypothetical protein.
  
     0.655
Your Current Organism:
Desulfomicrobium baculatum
NCBI taxonomy Id: 525897
Other names: D. baculatum DSM 4028, Desulfomicrobium baculatum DSM 4028, Desulfomicrobium baculatum str. DSM 4028, Desulfomicrobium baculatum strain DSM 4028
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.