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Sdel_0022 protein (Sulfurospirillum deleyianum) - STRING interaction network
"Sdel_0022" - Nickel ABC transporter permease subunit NikC in Sulfurospirillum deleyianum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sdel_0022Nickel ABC transporter permease subunit NikC (273 aa)    
Predicted Functional Partners:
Sdel_0023
ABC transporter (272 aa)
  0.998
Sdel_0021
Nickel ABC transporter permease (311 aa)
  0.998
Sdel_0024
ABC transporter (254 aa)
 
  0.997
Sdel_0020
Nickel ABC transporter periplasmic protein (539 aa)
 
  0.995
Sdel_2034
Oligopeptide ABC transporter permease (309 aa)
  0.990
Sdel_2033
Nickel ABC transporter periplasmic protein (530 aa)
 
  0.986
Sdel_0425
Binding-protein-dependent transporters inner membrane component (322 aa)
  0.950
Sdel_1902
Family 5 extracellular solute-binding protein (501 aa)
  0.929
Sdel_1663
ABC transporter (231 aa)
   
  0.910
Sdel_0364
Family 5 extracellular solute-binding protein (529 aa)
 
  0.851
Your Current Organism:
Sulfurospirillum deleyianum
NCBI taxonomy Id: 525898
Other names: Dehalospirillum, Dehalospirillum Scholz-Muramatsu et al. 2002, Geospirillum, S. deleyianum, S. deleyianum DSM 6946, Sulfurospirillum, Sulfurospirillum deleyianum, Sulfurospirillum deleyianum DSM 6946, Sulfurospirillum deleyianum str. DSM 6946, Sulfurospirillum deleyianum strain DSM 6946
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