STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sdel_0332PFAM: DNA polymerase beta domain protein region; KEGG: gur:Gura_0241 DNA polymerase beta subunit. (94 aa)    
Predicted Functional Partners:
Sdel_0333
PFAM: protein of unknown function DUF86; KEGG: hha:Hhal_0685 hypothetical protein.
 
  
 0.952
Sdel_1076
PFAM: protein of unknown function DUF86; KEGG: gur:Gura_4166 hypothetical protein.
 
  
 0.798
Sdel_0334
KEGG: bch:Bcen2424_0454 phage protein.
       0.773
Sdel_0930
PFAM: protein of unknown function DUF86; KEGG: gur:Gura_3202 hypothetical protein.
 
  
 0.757
Sdel_1208
PFAM: protein of unknown function DUF86; KEGG: nis:NIS_0575 hypothetical protein.
 
  
 0.713
Sdel_1519
PFAM: protein of unknown function DUF86; KEGG: sun:SUN_0149 hypothetical protein.
 
  
 0.657
Sdel_0331
KEGG: tdn:Suden_0322 hypothetical protein.
       0.530
Your Current Organism:
Sulfurospirillum deleyianum
NCBI taxonomy Id: 525898
Other names: S. deleyianum DSM 6946, Sulfurospirillum deleyianum DSM 6946, Sulfurospirillum deleyianum str. DSM 6946, Sulfurospirillum deleyianum strain DSM 6946
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.