STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sdel_0397PFAM: Dynamin family protein; KEGG: abu:Abu_0298 ATP/GTP-binding protein. (789 aa)    
Predicted Functional Partners:
Sdel_0398
PFAM: Dynamin family protein; GTP-binding protein HSR1-related; KEGG: abu:Abu_0297 ATP/GTP-binding protein.
 
    
0.867
Sdel_1563
KEGG: wsu:WS1415 hypothetical protein.
  
     0.656
Sdel_0394
PFAM: Fumarate reductase respiratory complex; KEGG: abu:Abu_0301 fumarate reductase cytochrome b- 556 subunit.
 
     0.648
Sdel_1879
KEGG: wsu:WS1659 hypothetical protein.
  
     0.642
Sdel_0396
TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: cco:CCC13826_0424 fumarate reductase iron- sulfur subunit; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
 
     0.602
Sdel_0362
KEGG: wsu:WS1850 putative cytochrome c-type haem- binding periplasmic protein.
  
     0.601
Sdel_0036
PFAM: protein of unknown function DUF6 transmembrane; KEGG: wsu:WS0127 putative integral membrane protein.
  
     0.575
Sdel_0395
KEGG: ccv:CCV52592_2205 fumarate reductase flavoprotein subunit; TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein.
       0.547
Sdel_0711
KEGG: wsu:WS1180 hypothetical protein.
  
     0.468
Sdel_1555
PFAM: NnrS family protein; KEGG: tdn:Suden_1349 NnrS.
  
     0.468
Your Current Organism:
Sulfurospirillum deleyianum
NCBI taxonomy Id: 525898
Other names: S. deleyianum DSM 6946, Sulfurospirillum deleyianum DSM 6946, Sulfurospirillum deleyianum str. DSM 6946, Sulfurospirillum deleyianum strain DSM 6946
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