STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sdel_0473TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system; KEGG: tdn:Suden_0812 plasmid stabilization system protein. (84 aa)    
Predicted Functional Partners:
Sdel_0472
KEGG: tdn:Suden_0813 CopG-like DNA-binding.
       0.773
Sdel_0721
TIGRFAM: addiction module antitoxin, RelB/DinJ family; PFAM: RelB antitoxin; KEGG: afr:AFE_1589 DNA-damage-inducible protein J.
  
 
 0.641
Sdel_1496
TIGRFAM: addiction module antitoxin, RelB/DinJ family; PFAM: RelB antitoxin; KEGG: pla:Plav_1874 addiction module antitoxin.
  
 
 0.641
Sdel_1524
TIGRFAM: addiction module antitoxin, RelB/DinJ family; PFAM: RelB antitoxin; KEGG: rfe:RF_0827 DNA-damage-inducible protein J.
  
 
 0.641
Sdel_0470
PFAM: CopG domain protein DNA-binding domain protein; KEGG: gme:Gmet_A3570 CopG-like DNA-binding protein.
     
 0.573
Sdel_0471
TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system; KEGG: tdn:Suden_0387 hypothetical protein.
       0.508
Sdel_0474
PFAM: outer membrane porin; KEGG: wsu:WS0983 hypothetical protein.
       0.499
Sdel_0621
KEGG: tdn:Suden_0506 hypothetical protein.
   
 
 0.479
Sdel_1362
KEGG: cha:CHAB381_1101 hypothetical protein.
   
 
 0.479
Sdel_2201
PFAM: GCN5-related N-acetyltransferase; KEGG: tdn:Suden_0790 hypothetical protein.
  
     0.400
Your Current Organism:
Sulfurospirillum deleyianum
NCBI taxonomy Id: 525898
Other names: S. deleyianum DSM 6946, Sulfurospirillum deleyianum DSM 6946, Sulfurospirillum deleyianum str. DSM 6946, Sulfurospirillum deleyianum strain DSM 6946
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