STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sdel_0475PFAM: Extracellular ligand-binding receptor; KEGG: cff:CFF8240_0399 branched-chain amino-acid ABC transport system periplasmic binding protein. (372 aa)    
Predicted Functional Partners:
Sdel_0477
PFAM: inner-membrane translocator; KEGG: cla:Cla_1113 branched-chain amino-acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.996
Sdel_0476
PFAM: inner-membrane translocator; KEGG: cff:CFF8240_0400 hydrophobic amino acid ABC transporter permease/ATP-binding protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.995
Sdel_0478
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cla:Cla_1114 branched-chain amino acid ABC transporter, ATP-binding protein.
 
 
 0.995
Sdel_0479
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cju:C8J_0951 high affinity branched-chain amino acid ABC transporter, ATP-binding protein.
 
 
 0.993
Sdel_0108
PFAM: Extracellular ligand-binding receptor; KEGG: tdn:Suden_0825 extracellular ligand-binding receptor.
  
  
  0.936
Sdel_2079
PFAM: Extracellular ligand-binding receptor; KEGG: tdn:Suden_0825 extracellular ligand-binding receptor.
  
  
  0.913
Sdel_1490
PFAM: Extracellular ligand-binding receptor; KEGG: cff:CFF8240_0399 branched-chain amino-acid ABC transport system periplasmic binding protein.
  
  
 
0.901
Sdel_0474
PFAM: outer membrane porin; KEGG: wsu:WS0983 hypothetical protein.
       0.471
Sdel_0480
PFAM: cytochrome c assembly protein; KEGG: cff:CFF8240_0404 CcmF/CcyK/CcsA family cytochrome c biogenesis protein.
       0.433
rpmE
Ribosomal protein L31; Binds the 23S rRNA.
  
    0.424
Your Current Organism:
Sulfurospirillum deleyianum
NCBI taxonomy Id: 525898
Other names: S. deleyianum DSM 6946, Sulfurospirillum deleyianum DSM 6946, Sulfurospirillum deleyianum str. DSM 6946, Sulfurospirillum deleyianum strain DSM 6946
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