STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sdel_0500KEGG: wsu:WS0208 hypothetical protein. (350 aa)    
Predicted Functional Partners:
Sdel_0205
PFAM: CheW domain protein; response regulator receiver; Signal transducing histidine kinase homodimeric; Hpt domain protein; ATP-binding region ATPase domain protein; SMART: CheW domain protein; response regulator receiver; Hpt domain protein; ATP-binding region ATPase domain protein; KEGG: cff:CFF8240_0331 chemotaxis histidine kinase.
   
 
 0.887
Sdel_0588
PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; KEGG: nis:NIS_1346 two-component sensor histidine kinase/response regulator.
   
 
 0.645
Sdel_2093
PAS sensor protein; KEGG: bmn:BMA10247_A1432 sensory box histidine kinase/response regulator; TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; SMART: PAS domain containing protein.
  
 
 0.642
Sdel_0587
PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: cha:CHAB381_0643 response regulator receiver domain-containing protein.
   
 
 0.629
Sdel_1763
PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: cjd:JJD26997_0603 chemotaxis protein CheY.
   
 
 0.629
Sdel_1983
PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: wsu:WS1376 CheY and CheB genes (chemotaxis protein).
   
 
 0.629
Sdel_1993
PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: wsu:WS1077 putative two-component response regulator.
   
 
 0.629
Sdel_0499
KEGG: cco:CCC13826_0054 hypothetical protein.
       0.561
Sdel_0501
Pyruvate kinase; KEGG: cff:CFF8240_0630 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; Belongs to the pyruvate kinase family.
       0.509
Your Current Organism:
Sulfurospirillum deleyianum
NCBI taxonomy Id: 525898
Other names: S. deleyianum DSM 6946, Sulfurospirillum deleyianum DSM 6946, Sulfurospirillum deleyianum str. DSM 6946, Sulfurospirillum deleyianum strain DSM 6946
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