STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sdel_0692KEGG: wsu:WS0392 hypothetical protein. (169 aa)    
Predicted Functional Partners:
Sdel_0695
PFAM: protein of unknown function DUF214; KEGG: wsu:WS0389 hypothetical protein.
       0.809
Sdel_0696
KEGG: wsu:WS0388 hypothetical protein.
       0.809
Sdel_0694
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: wsu:WS0390 ABC transporter ATPase.
       0.797
Sdel_0693
KEGG: wsu:WS0391 hypothetical protein.
       0.784
Sdel_0697
PFAM: NosL family protein; KEGG: wsu:WS0387 hypothetical protein.
       0.784
Sdel_0698
Sel1 domain protein repeat-containing protein; Hydrolyzes 6-aminopenicillinic acid and 7- aminocephalosporanic acid (ACA) derivatives.
       0.729
Sdel_0700
PFAM: Polysulphide reductase NrfD; KEGG: wsu:WS0382 putative nitrate reductase, formate dependent.
  
    0.682
Sdel_0699
PFAM: cytochrome c assembly protein; KEGG: wsu:WS0383 NrfI protein.
       0.678
Sdel_0701
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: wsu:WS0381 putative nitrite reductase, formate-dependent, Fe-S centers.
       0.627
Sdel_0702
PFAM: FKBP-type peptidyl-prolyl isomerase domain protein; peptidylprolyl isomerase FKBP-type; KEGG: wsu:WS0380 peptidyl-prolyl cis-trans isomerase.
       0.604
Your Current Organism:
Sulfurospirillum deleyianum
NCBI taxonomy Id: 525898
Other names: S. deleyianum DSM 6946, Sulfurospirillum deleyianum DSM 6946, Sulfurospirillum deleyianum str. DSM 6946, Sulfurospirillum deleyianum strain DSM 6946
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.