STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sdel_0764Hypothetical protein. (227 aa)    
Predicted Functional Partners:
Sdel_0762
Hypothetical protein; KEGG: pst:PSPTO_0532 putative lipoprotein.
       0.773
Sdel_0763
TIGRFAM: P-type conjugative transfer protein TrbL; KEGG: kpe:KPK_1289 P-type conjugative transfer protein TrbL.
       0.773
Sdel_0761
TIGRFAM: P-type conjugative transfer protein TrbJ; KEGG: avi:Avi_9655 P-type conjugative transfer protein TrbJ.
       0.757
Sdel_0765
KEGG: xfn:XfasM23_2250 putative plasmid conjugal transfer protein.
       0.438
Sdel_0766
PFAM: Relaxase/mobilization nuclease family protein; KEGG: sun:SUN_2446 DNA relaxase TraI.
       0.438
Sdel_0759
PFAM: Prophage CP4-57 regulatory; KEGG: sun:SUN_2414 hypothetical protein.
       0.408
Sdel_0760
Hypothetical protein.
       0.408
Your Current Organism:
Sulfurospirillum deleyianum
NCBI taxonomy Id: 525898
Other names: S. deleyianum DSM 6946, Sulfurospirillum deleyianum DSM 6946, Sulfurospirillum deleyianum str. DSM 6946, Sulfurospirillum deleyianum strain DSM 6946
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.