Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Sdel_0804KEGG: ccv:CCV52592_0536 hypothetical protein. (65 aa)    
Predicted Functional Partners:
Sdel_0805
PFAM: molybdopterin oxidoreductase Fe4S4 region; KEGG: tdn:Suden_0820 formate dehydrogenase alpha subunit.
       0.735
Sdel_0807
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: nam:NAMH_1308 formate dehydrogenase subunit B.
       0.588
Sdel_0806
PFAM: molydopterin dinucleotide-binding region; molybdopterin oxidoreductase; KEGG: cco:CCC13826_0208 fumarate hydratase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
       0.583
Sdel_0808
TIGRFAM: formate dehydrogenase, gamma subunit; KEGG: dps:DP2988 formate dehydrogenase, gamma subunit.
       0.573
Sdel_0803
KEGG: cco:CCC13826_0205 hypothetical protein.
       0.563
Your Current Organism:
Sulfurospirillum deleyianum
NCBI taxonomy Id: 525898
Other names: S. deleyianum DSM 6946, Sulfurospirillum deleyianum DSM 6946, Sulfurospirillum deleyianum str. DSM 6946, Sulfurospirillum deleyianum strain DSM 6946
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