Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Sdel_0807PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: nam:NAMH_1308 formate dehydrogenase subunit B. (199 aa)    
Predicted Functional Partners:
Sdel_0808
TIGRFAM: formate dehydrogenase, gamma subunit; KEGG: dps:DP2988 formate dehydrogenase, gamma subunit.
 
 0.997
Sdel_0806
PFAM: molydopterin dinucleotide-binding region; molybdopterin oxidoreductase; KEGG: cco:CCC13826_0208 fumarate hydratase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.996
Sdel_0805
PFAM: molybdopterin oxidoreductase Fe4S4 region; KEGG: tdn:Suden_0820 formate dehydrogenase alpha subunit.
 
 0.994
Sdel_2072
TIGRFAM: formate dehydrogenase, gamma subunit; KEGG: cjd:JJD26997_1861 formate dehydrogenase, cytochrome b subunit.
 
 0.991
Sdel_2074
PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: dps:DP2986 formate dehydrogenase, chain A; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.991
Sdel_2075
PFAM: molybdopterin oxidoreductase Fe4S4 region; KEGG: dps:DP2986 formate dehydrogenase, chain A.
 
 0.988
Sdel_0039
PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide- binding region; KEGG: tdn:Suden_1902 molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.949
Sdel_2073
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: cco:CCC13826_0209 cytoplasmic membrane protein.
  
  
 
0.901
Sdel_0813
PFAM: formylmethanofuran dehydrogenase subunit E region; KEGG: ppd:Ppro_2088 formylmethanofuran dehydrogenase, subunit E region.
     
  0.900
purU
Formyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4).
     
  0.900
Your Current Organism:
Sulfurospirillum deleyianum
NCBI taxonomy Id: 525898
Other names: S. deleyianum DSM 6946, Sulfurospirillum deleyianum DSM 6946, Sulfurospirillum deleyianum str. DSM 6946, Sulfurospirillum deleyianum strain DSM 6946
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