STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sdel_0817Methyltransferase; KEGG: cff:CFF8240_0960 methyltransferase. (253 aa)    
Predicted Functional Partners:
Sdel_0813
PFAM: formylmethanofuran dehydrogenase subunit E region; KEGG: ppd:Ppro_2088 formylmethanofuran dehydrogenase, subunit E region.
 
     0.744
Sdel_0816
PFAM: periplasmic binding protein; KEGG: nam:NAMH_0731 HemV-3 iron (III) ABC transporter, ATP-binding protein.
 
 
   0.609
Sdel_0818
PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; KEGG: wsu:WS0949 MCP domain-containing signal transducer.
       0.608
Sdel_0815
PFAM: transport system permease protein; ABC-3 protein; KEGG: dol:Dole_1652 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
     0.607
Sdel_0814
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dds:Ddes_0989 ABC transporter related.
     
 0.525
Sdel_2069
PFAM: periplasmic binding protein; KEGG: sat:SYN_01056 iron(III) dicitrate-binding protein.
  
 
   0.454
crcB
CrcB protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.
  
    0.441
Sdel_0811
KEGG: wsu:WS1139 hypothetical protein.
       0.438
Sdel_0819
PFAM: chemotaxis sensory transducer; Cache domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: ccv:CCV52592_2035 putative transducer.
       0.422
Sdel_0810
PFAM: regulatory protein LysR; TOBE domain protein; KEGG: abu:Abu_0013 molybdenum-binding protein.
  
   0.402
Your Current Organism:
Sulfurospirillum deleyianum
NCBI taxonomy Id: 525898
Other names: S. deleyianum DSM 6946, Sulfurospirillum deleyianum DSM 6946, Sulfurospirillum deleyianum str. DSM 6946, Sulfurospirillum deleyianum strain DSM 6946
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.