Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Sdel_1007PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: gme:Gmet_3281 transposase/IS protein. (273 aa)    
Predicted Functional Partners:
Sdel_1008
PFAM: Integrase catalytic region; KEGG: lpc:LPC_1389 putative transposase for insertion sequence element IS5376.
 
   0.883
Sdel_0788
PFAM: Integrase catalytic region; KEGG: lpc:LPC_1389 putative transposase for insertion sequence element IS5376.
 
   0.640
Sdel_1009
PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mmw:Mmwyl1_3360 hypothetical protein.
       0.527
Sdel_1010
KEGG: rlg:Rleg_3778 binding-protein-dependent transport systems inner membrane component.
       0.527
Sdel_1595
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily.
  
 
 0.516
Sdel_0922
PFAM: Integrase catalytic region; KEGG: lpc:LPC_1389 putative transposase for insertion sequence element IS5376.
  
   0.507
Sdel_0942
PFAM: Integrase catalytic region; KEGG: lpc:LPC_1389 putative transposase for insertion sequence element IS5376.
  
   0.507
Sdel_1246
PFAM: Integrase catalytic region; KEGG: lpc:LPC_1389 putative transposase for insertion sequence element IS5376.
  
   0.507
Sdel_1254
PFAM: Integrase catalytic region; KEGG: lpc:LPC_1389 putative transposase for insertion sequence element IS5376.
  
   0.507
Sdel_1258
PFAM: Integrase catalytic region; KEGG: lpc:LPC_1389 putative transposase for insertion sequence element IS5376.
  
   0.507
Your Current Organism:
Sulfurospirillum deleyianum
NCBI taxonomy Id: 525898
Other names: S. deleyianum DSM 6946, Sulfurospirillum deleyianum DSM 6946, Sulfurospirillum deleyianum str. DSM 6946, Sulfurospirillum deleyianum strain DSM 6946
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