STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sdel_1211KEGG: sfr:Sfri_1085 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein. (381 aa)    
Predicted Functional Partners:
Sdel_0467
PFAM: EAL domain protein; SMART: EAL domain protein; KEGG: abu:Abu_0830 EAL domain-containing protein.
 
    0.939
Sdel_0912
PFAM: metal-dependent phosphohydrolase HD sub domain; response regulator receiver; SMART: response regulator receiver; metal-dependent phosphohydrolase HD region; KEGG: ajs:Ajs_1044 response regulator receiver modulated metal dependent phosphohydrolase.
 
 
  
 0.816
Sdel_0330
Diguanylate cyclase; KEGG: wsu:WS0108 GGDEF family protein; TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein.
 
    0.796
Sdel_1820
KEGG: tdn:Suden_0380 diguanylate cyclase/phosphodiesterase; TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein.
 
    0.784
Sdel_0893
Diguanylate cyclase; KEGG: abu:Abu_0545 EAL/GGDEF domain-containing protein; TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; response regulator receiver; SMART: EAL domain protein; response regulator receiver; GGDEF domain containing protein.
  
 0.764
Sdel_0268
Diguanylate cyclase; KEGG: pin:Ping_1203 sensor histidine kinase PAS domain-containing protein; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold-3 domain protein; FIST C domain; domain of unknown function DUF1745; GGDEF domain containing protein; PAS fold domain protein; SMART: EAL domain protein; GGDEF domain containing protein.
 
 0.750
Sdel_0006
PFAM: EAL domain protein; SMART: EAL domain protein; KEGG: cff:CFF8240_0004 diguanylate cyclase/phosphodiesterase, putative.
 
    0.743
Sdel_2032
PFAM: EAL domain protein; SMART: EAL domain protein; KEGG: wsu:WS0772 sensor protein.
 
    0.688
Sdel_0748
PAS sensor protein; KEGG: nam:NAMH_0747 diguanylate cyclase/phosphodiesterase; TIGRFAM: PAS sensor protein; PFAM: EAL domain protein; PAS fold-3 domain protein; response regulator receiver; PAS fold-4 domain protein; PAS fold domain protein; SMART: EAL domain protein; response regulator receiver; PAC repeat-containing protein; PAS domain containing protein.
 
 0.677
Sdel_2051
PFAM: EAL domain protein; SMART: EAL domain protein; KEGG: wsu:WS2174 hypothetical protein.
  
  
 0.669
Your Current Organism:
Sulfurospirillum deleyianum
NCBI taxonomy Id: 525898
Other names: S. deleyianum DSM 6946, Sulfurospirillum deleyianum DSM 6946, Sulfurospirillum deleyianum str. DSM 6946, Sulfurospirillum deleyianum strain DSM 6946
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.