STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sdel_1237KEGG: cju:C8J_0906 hypothetical protein. (426 aa)    
Predicted Functional Partners:
Sdel_1236
TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily; KEGG: nis:NIS_0687 uracil-DNA glycosylase.
       0.809
Sdel_2252
PFAM: protein of unknown function DUF814; Fibronectin-binding A domain protein; KEGG: tdn:Suden_0123 hypothetical protein.
  
  
 0.575
Sdel_1235
PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: abu:Abu_1725 DNA-binding response regulator.
       0.485
Your Current Organism:
Sulfurospirillum deleyianum
NCBI taxonomy Id: 525898
Other names: S. deleyianum DSM 6946, Sulfurospirillum deleyianum DSM 6946, Sulfurospirillum deleyianum str. DSM 6946, Sulfurospirillum deleyianum strain DSM 6946
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.