STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sdel_1255PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: gme:Gmet_3281 transposase/IS protein. (273 aa)    
Predicted Functional Partners:
Sdel_1254
PFAM: Integrase catalytic region; KEGG: lpc:LPC_1389 putative transposase for insertion sequence element IS5376.
    0.878
Sdel_0788
PFAM: Integrase catalytic region; KEGG: lpc:LPC_1389 putative transposase for insertion sequence element IS5376.
 
    0.624
Sdel_1595
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily.
  
 
 0.620
Sdel_0922
PFAM: Integrase catalytic region; KEGG: lpc:LPC_1389 putative transposase for insertion sequence element IS5376.
 
    0.485
Sdel_0942
PFAM: Integrase catalytic region; KEGG: lpc:LPC_1389 putative transposase for insertion sequence element IS5376.
 
    0.485
Sdel_1008
PFAM: Integrase catalytic region; KEGG: lpc:LPC_1389 putative transposase for insertion sequence element IS5376.
 
    0.485
Sdel_1246
PFAM: Integrase catalytic region; KEGG: lpc:LPC_1389 putative transposase for insertion sequence element IS5376.
 
    0.485
Sdel_1258
PFAM: Integrase catalytic region; KEGG: lpc:LPC_1389 putative transposase for insertion sequence element IS5376.
 
    0.485
Sdel_1999
PFAM: Integrase catalytic region; KEGG: lpc:LPC_1389 putative transposase for insertion sequence element IS5376.
 
    0.485
Sdel_0934
PFAM: Integrase catalytic region; KEGG: lpc:LPC_1389 putative transposase for insertion sequence element IS5376.
 
    0.473
Your Current Organism:
Sulfurospirillum deleyianum
NCBI taxonomy Id: 525898
Other names: S. deleyianum DSM 6946, Sulfurospirillum deleyianum DSM 6946, Sulfurospirillum deleyianum str. DSM 6946, Sulfurospirillum deleyianum strain DSM 6946
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.