STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sdel_1473KEGG: pca:Pcar_0222 hypothetical protein. (67 aa)    
Predicted Functional Partners:
Sdel_1474
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: sfu:Sfum_1311 FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
 
     0.956
Sdel_1470
PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: sfu:Sfum_1314 radical SAM domain-containing protein.
 
     0.955
Sdel_1471
PFAM: C_GCAxxG_C_C family protein; KEGG: dde:Dde_3543 hypothetical protein.
 
     0.955
Sdel_1467
PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: gur:Gura_1006 metal dependent phosphohydrolase.
 
     0.954
Sdel_1469
KEGG: sfu:Sfum_1315 hypothetical protein.
 
     0.954
Sdel_1472
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: sfu:Sfum_1312 methyltransferase type 11.
 
     0.954
Sdel_1468
PFAM: protein of unknown function DUF182; KEGG: pca:Pcar_0227 xanthine and Co dehydrogenase maturation factor.
 
     0.950
Sdel_1475
PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; ferredoxin; [2Fe-2S]-binding domain protein; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: sfu:Sfum_1310 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding.
 
     0.915
Sdel_1466
PFAM: Phosphoglycerate mutase; KEGG: dat:HRM2_06990 putative molybdopterine- guanine dinucleotide biosynthesis protein MobA.
 
     0.876
Your Current Organism:
Sulfurospirillum deleyianum
NCBI taxonomy Id: 525898
Other names: S. deleyianum DSM 6946, Sulfurospirillum deleyianum DSM 6946, Sulfurospirillum deleyianum str. DSM 6946, Sulfurospirillum deleyianum strain DSM 6946
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