STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sdel_1476PFAM: domain of unknown function DUF1745; FIST C domain; ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: wsu:WS0901 GGDEF family protein. (629 aa)    
Predicted Functional Partners:
Sdel_1477
PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: wsu:WS0900 putative two-component regulator.
 
 
 0.954
Sdel_2242
Diguanylate cyclase; KEGG: sun:SUN_1481 hypothetical protein; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; Cache type 2 domain protein; SMART: EAL domain protein; GGDEF domain containing protein.
 
 
 0.933
Sdel_0363
PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: wsu:WS1434 putative two-component regulator.
 
 
 0.828
Sdel_2093
PAS sensor protein; KEGG: bmn:BMA10247_A1432 sensory box histidine kinase/response regulator; TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; SMART: PAS domain containing protein.
  
 
 0.805
Sdel_0743
PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: wsu:WS0657 two component response regulator.
 
 
 0.791
Sdel_2004
PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: wsu:WS0657 two component response regulator.
 
 
 0.785
Sdel_0705
PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: cco:CCC13826_1869 NAD(P)H-flavin oxidoreductase.
 
 
 0.746
Sdel_1272
PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: wsu:WS0657 two component response regulator.
 
 
 0.745
Sdel_1983
PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: wsu:WS1376 CheY and CheB genes (chemotaxis protein).
 
 
 0.743
Sdel_0272
PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: abu:Abu_0904 two-component response regulator.
 
 
 0.738
Your Current Organism:
Sulfurospirillum deleyianum
NCBI taxonomy Id: 525898
Other names: S. deleyianum DSM 6946, Sulfurospirillum deleyianum DSM 6946, Sulfurospirillum deleyianum str. DSM 6946, Sulfurospirillum deleyianum strain DSM 6946
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