STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sdel_1766KEGG: nis:NIS_1413 general glycosylation pathway protein. (301 aa)    
Predicted Functional Partners:
hisA
KEGG: nis:NIS_1411 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4- carboxamide isomerase; TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; PFAM: histidine biosynthesis protein.
       0.809
hisH
Imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.
       0.809
Sdel_1767
PFAM: Oligosaccharyl transferase STT3 subunit; KEGG: tdn:Suden_1474 oligosaccharyl transferase, STT3 subunit.
 
     0.759
Sdel_1769
PFAM: polysaccharide biosynthesis protein CapD; Male sterility domain; dTDP-4-dehydrorhamnose reductase; short-chain dehydrogenase/reductase SDR; NAD-dependent epimerase/dehydratase; KEGG: abu:Abu_0696 sugar epimerase/dehydratase.
     
 0.734
Sdel_0729
SMART: WD-40 repeat protein; KEGG: wsu:WS1171 putative periplasmic protein.
  
     0.720
Sdel_0524
KEGG: tdn:Suden_1394 fis family transcriptional regulator.
  
     0.688
Sdel_1768
PFAM: lipopolysaccharide biosynthesis protein; KEGG: nam:NAMH_1653 chain length determinant protein.
       0.682
Sdel_1759
KEGG: cff:CFF8240_1345 CDP-diacylglycerol--serine O- phosphatidyltransferse; TIGRFAM: CDP-diacylglycerol/serine O- phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
       0.643
Sdel_1760
PFAM: phosphatidylserine decarboxylase-related; KEGG: ccv:CCV52592_1195 phosphatidylserine decarboxylase.
       0.643
ftsH
ATP-dependent metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
       0.643
Your Current Organism:
Sulfurospirillum deleyianum
NCBI taxonomy Id: 525898
Other names: S. deleyianum DSM 6946, Sulfurospirillum deleyianum DSM 6946, Sulfurospirillum deleyianum str. DSM 6946, Sulfurospirillum deleyianum strain DSM 6946
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