node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Sdel_0004 | Sdel_0541 | Sdel_0004 | Sdel_0541 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | KEGG: sun:SUN_0644 exodeoxyribonuclease III; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase. | 0.856 |
Sdel_0004 | Sdel_1796 | Sdel_0004 | Sdel_1796 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | PFAM: ATP dependent DNA ligase; KEGG: msu:MS0939 DNA ligase. | 0.972 |
Sdel_0004 | polA | Sdel_0004 | Sdel_0558 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.991 |
Sdel_0541 | Sdel_0004 | Sdel_0541 | Sdel_0004 | KEGG: sun:SUN_0644 exodeoxyribonuclease III; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.856 |
Sdel_0541 | Sdel_1796 | Sdel_0541 | Sdel_1796 | KEGG: sun:SUN_0644 exodeoxyribonuclease III; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase. | PFAM: ATP dependent DNA ligase; KEGG: msu:MS0939 DNA ligase. | 0.775 |
Sdel_0541 | Sdel_1815 | Sdel_0541 | Sdel_1815 | KEGG: sun:SUN_0644 exodeoxyribonuclease III; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase. | TIGRFAM: D,D-heptose 1,7-bisphosphate phosphatase; histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; PFAM: Polynucleotide kinase 3 phosphatase central region; KEGG: nis:NIS_1450 D-glycero-D-manno-heptose 1,7- bisphosphate phosphatase. | 0.456 |
Sdel_0541 | polA | Sdel_0541 | Sdel_0558 | KEGG: sun:SUN_0644 exodeoxyribonuclease III; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.855 |
Sdel_1795 | Sdel_1796 | Sdel_1795 | Sdel_1796 | Nucleotide sugar dehydrogenase; KEGG: abu:Abu_0659 UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP- glucose/GDP-mannose dehydrogenase dimerisation; UDP- glucose/GDP-mannose dehydrogenase. | PFAM: ATP dependent DNA ligase; KEGG: msu:MS0939 DNA ligase. | 0.763 |
Sdel_1795 | Sdel_1797 | Sdel_1795 | Sdel_1797 | Nucleotide sugar dehydrogenase; KEGG: abu:Abu_0659 UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP- glucose/GDP-mannose dehydrogenase dimerisation; UDP- glucose/GDP-mannose dehydrogenase. | TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; KEGG: abu:Abu_1816 dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. | 0.919 |
Sdel_1795 | Sdel_1798 | Sdel_1795 | Sdel_1798 | Nucleotide sugar dehydrogenase; KEGG: abu:Abu_0659 UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP- glucose/GDP-mannose dehydrogenase dimerisation; UDP- glucose/GDP-mannose dehydrogenase. | Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. | 0.952 |
Sdel_1795 | Sdel_1799 | Sdel_1795 | Sdel_1799 | Nucleotide sugar dehydrogenase; KEGG: abu:Abu_0659 UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP- glucose/GDP-mannose dehydrogenase dimerisation; UDP- glucose/GDP-mannose dehydrogenase. | Phosphomannomutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; KEGG: sun:SUN_1934 phosphomannomutase. | 0.819 |
Sdel_1795 | Sdel_1800 | Sdel_1795 | Sdel_1800 | Nucleotide sugar dehydrogenase; KEGG: abu:Abu_0659 UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP- glucose/GDP-mannose dehydrogenase dimerisation; UDP- glucose/GDP-mannose dehydrogenase. | PFAM: 3'-5' exonuclease, PolB-like; KEGG: cco:CCC13826_0469 large-conductance mechanosensitive channel. | 0.777 |
Sdel_1796 | Sdel_0004 | Sdel_1796 | Sdel_0004 | PFAM: ATP dependent DNA ligase; KEGG: msu:MS0939 DNA ligase. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.972 |
Sdel_1796 | Sdel_0541 | Sdel_1796 | Sdel_0541 | PFAM: ATP dependent DNA ligase; KEGG: msu:MS0939 DNA ligase. | KEGG: sun:SUN_0644 exodeoxyribonuclease III; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase. | 0.775 |
Sdel_1796 | Sdel_1795 | Sdel_1796 | Sdel_1795 | PFAM: ATP dependent DNA ligase; KEGG: msu:MS0939 DNA ligase. | Nucleotide sugar dehydrogenase; KEGG: abu:Abu_0659 UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP- glucose/GDP-mannose dehydrogenase dimerisation; UDP- glucose/GDP-mannose dehydrogenase. | 0.763 |
Sdel_1796 | Sdel_1797 | Sdel_1796 | Sdel_1797 | PFAM: ATP dependent DNA ligase; KEGG: msu:MS0939 DNA ligase. | TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; KEGG: abu:Abu_1816 dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. | 0.773 |
Sdel_1796 | Sdel_1798 | Sdel_1796 | Sdel_1798 | PFAM: ATP dependent DNA ligase; KEGG: msu:MS0939 DNA ligase. | Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. | 0.773 |
Sdel_1796 | Sdel_1799 | Sdel_1796 | Sdel_1799 | PFAM: ATP dependent DNA ligase; KEGG: msu:MS0939 DNA ligase. | Phosphomannomutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; KEGG: sun:SUN_1934 phosphomannomutase. | 0.774 |
Sdel_1796 | Sdel_1800 | Sdel_1796 | Sdel_1800 | PFAM: ATP dependent DNA ligase; KEGG: msu:MS0939 DNA ligase. | PFAM: 3'-5' exonuclease, PolB-like; KEGG: cco:CCC13826_0469 large-conductance mechanosensitive channel. | 0.809 |
Sdel_1796 | Sdel_1815 | Sdel_1796 | Sdel_1815 | PFAM: ATP dependent DNA ligase; KEGG: msu:MS0939 DNA ligase. | TIGRFAM: D,D-heptose 1,7-bisphosphate phosphatase; histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; PFAM: Polynucleotide kinase 3 phosphatase central region; KEGG: nis:NIS_1450 D-glycero-D-manno-heptose 1,7- bisphosphate phosphatase. | 0.773 |