STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sdel_2008TIGRFAM: aspartate ammonia-lyase; PFAM: fumarate lyase; Fumarase C-like; KEGG: wsu:WS0662 aspartate ammonia-lyase. (468 aa)    
Predicted Functional Partners:
Sdel_2006
L-asparaginase, type II; KEGG: wsu:WS0660 periplasmic L-asparaginase II; TIGRFAM: L-asparaginase, type II; PFAM: Asparaginase/glutaminase; Belongs to the asparaginase 1 family.
 
 
 0.957
Sdel_2009
TIGRFAM: aspartate ammonia-lyase; PFAM: fumarate lyase; Fumarase C-like; KEGG: wsu:WS0662 aspartate ammonia-lyase.
 
  
 
0.944
Sdel_1178
L-asparaginase, type II; KEGG: cff:CFF8240_1025 L-asparaginase II; TIGRFAM: L-asparaginase, type II; PFAM: Asparaginase/glutaminase; Belongs to the asparaginase 1 family.
 
 
 0.932
Sdel_0441
PFAM: Asparaginase/glutaminase; KEGG: abu:Abu_1580 putative asparaginase.
  
 
 0.931
Sdel_0593
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate.
 
   
 0.915
argH
TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase; KEGG: tdn:Suden_0866 argininosuccinate lyase.
     
0.906
Sdel_0053
TIGRFAM: aspartate racemase; PFAM: Asp/Glu/hydantoin racemase; KEGG: cff:CFF8240_1412 aspartate racemase; Belongs to the aspartate/glutamate racemases family.
    
 0.905
Sdel_1291
PFAM: aminotransferase class I and II; KEGG: nis:NIS_0815 aspartate aminotransferase.
    
 0.903
Sdel_0055
TIGRFAM: adenylosuccinate lyase; PFAM: fumarate lyase; Adenylosuccinate lyase-like; KEGG: wsu:WS0416 adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
     
 0.902
pckA
Phosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA.
   
 
 0.902
Your Current Organism:
Sulfurospirillum deleyianum
NCBI taxonomy Id: 525898
Other names: S. deleyianum DSM 6946, Sulfurospirillum deleyianum DSM 6946, Sulfurospirillum deleyianum str. DSM 6946, Sulfurospirillum deleyianum strain DSM 6946
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