STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sdel_2075PFAM: molybdopterin oxidoreductase Fe4S4 region; KEGG: dps:DP2986 formate dehydrogenase, chain A. (188 aa)    
Predicted Functional Partners:
Sdel_2074
PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: dps:DP2986 formate dehydrogenase, chain A; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
     0.991
Sdel_0806
PFAM: molydopterin dinucleotide-binding region; molybdopterin oxidoreductase; KEGG: cco:CCC13826_0208 fumarate hydratase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 0.977
Sdel_2072
TIGRFAM: formate dehydrogenase, gamma subunit; KEGG: cjd:JJD26997_1861 formate dehydrogenase, cytochrome b subunit.
 
 
 0.951
Sdel_2073
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: cco:CCC13826_0209 cytoplasmic membrane protein.
 
 
 0.950
Sdel_0807
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: nam:NAMH_1308 formate dehydrogenase subunit B.
 
 
 0.879
Sdel_0808
TIGRFAM: formate dehydrogenase, gamma subunit; KEGG: dps:DP2988 formate dehydrogenase, gamma subunit.
 
 
 0.878
napD
Periplasmic nitrate reductase component NapD; Chaperone for NapA, the catalytic subunit of the periplasmic nitrate reductase. It binds directly and specifically to the twin- arginine signal peptide of NapA, preventing premature interaction with the Tat translocase and premature export.
  
 
 0.861
Sdel_0727
Nitrate reductase cytochrome c-type subunit (NapB); Electron transfer subunit of the periplasmic nitrate reductase complex NapAB; Belongs to the NapB family.
  
 
 0.857
Sdel_2078
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: tdn:Suden_0824 4Fe-4S ferredoxin, iron-sulfur binding.
 
  
 0.839
Sdel_0039
PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide- binding region; KEGG: tdn:Suden_1902 molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
  
 0.762
Your Current Organism:
Sulfurospirillum deleyianum
NCBI taxonomy Id: 525898
Other names: S. deleyianum DSM 6946, Sulfurospirillum deleyianum DSM 6946, Sulfurospirillum deleyianum str. DSM 6946, Sulfurospirillum deleyianum strain DSM 6946
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